CDS

Accession Number TCMCG048C33384
gbkey CDS
Protein Id XP_031254605.1
Location complement(join(317785..317868,317988..318056,318139..318205,318482..318549,318761..318871,318966..319023,319165..319201,319520..319613,319922..319987,320101..320165,320305..320449,320566..320631,321551..321700,322050..322119,322301..322377,322727..322795,322912..322995,323775..323818,323921..324064,324233..324431,324905..325033,325132..325215,325645..325758,326006..326113,326192..326287,327066..327134,327626..327727,327895..327990,328598..328681,329870..329987,330070..330146,330582..330770,330938..331185,331338..331488,332023..332139,332844..332951,333287..333386,333615..333691,334060..334110))
Gene LOC116112628
GeneID 116112628
Organism Pistacia vera

Protein

Length 1294aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA578116
db_source XM_031398745.1
Definition NPC intracellular cholesterol transporter 1-like [Pistacia vera]

EGGNOG-MAPPER Annotation

COG_category I
Description Niemann-Pick C1
KEGG_TC 2.A.6.6
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko02000        [VIEW IN KEGG]
KEGG_ko ko:K12385        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04142        [VIEW IN KEGG]
ko04979        [VIEW IN KEGG]
map04142        [VIEW IN KEGG]
map04979        [VIEW IN KEGG]
GOs GO:0000323        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005496        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005576        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005635        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005764        [VIEW IN EMBL-EBI]
GO:0005773        [VIEW IN EMBL-EBI]
GO:0005783        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0005887        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006486        [VIEW IN EMBL-EBI]
GO:0006629        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006869        [VIEW IN EMBL-EBI]
GO:0007034        [VIEW IN EMBL-EBI]
GO:0007041        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008202        [VIEW IN EMBL-EBI]
GO:0008206        [VIEW IN EMBL-EBI]
GO:0008289        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009100        [VIEW IN EMBL-EBI]
GO:0009101        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010876        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0015485        [VIEW IN EMBL-EBI]
GO:0015850        [VIEW IN EMBL-EBI]
GO:0015918        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016021        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0030301        [VIEW IN EMBL-EBI]
GO:0031224        [VIEW IN EMBL-EBI]
GO:0031226        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0032787        [VIEW IN EMBL-EBI]
GO:0032934        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0036094        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0042592        [VIEW IN EMBL-EBI]
GO:0042632        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043178        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043413        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044459        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0048471        [VIEW IN EMBL-EBI]
GO:0048878        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0055088        [VIEW IN EMBL-EBI]
GO:0055092        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0070085        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901135        [VIEW IN EMBL-EBI]
GO:1901137        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1901615        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAGCTCTCCCGGAGCTTGAGGTTTCTTCTCTCGATTTCTTTGTTTCAAGTTTTATTTATTCTATCTATAGTTCGAGCAGAGCGGTCTGATACACGCATGCTTTTGACTTCCGATGGCGTGACAGGGGTGAAACATGTCGAGGGATATTGTGCGATGTATGACATTTGCGGAGCACGTAGTGATGGAAAAATATTGAATTGTCCTAATGGTTCCCCATCTGTGAAGCCAGATGACTTGCTATCATCAAAGATTCAAAGTTTGTGCCCAACAATTACTGGCAATGTTTGTTGTACAGAAGCTCAATTCAACATTTTACGGTCACAAGTTCAGCAAGCCATTCCTTTTCTTGTAGGCTGTCCAGCATGCTTGAGAAACTTTCTAAATCTATTTTGTGAGCTTTCCTGCTCTCCAAATCAGAGTTTATTTATCAACGTGACTTCCGTTTCTCAGGTCAATAAAAATATGACAGTGAATGAGATTGATTATTATATAACCGACACTTTTGGTCAAGGGTTATATGAATCTTGCAAGGATGTAAAGTTTGGAACCATGAATACTCGAGCTCTAGATTTTATTGGTTCTGGCGCTCAAAATTTTAAAGATTGGTTCACTTTTATTGGTAGACGGGCTGCTCCTAATTTGCCTGGTTCTCCTTATCCAATTAAATTTTTGCCAAGTGCTCCTGAGTCATCTGGGATGAAACCTATGAATGTAACTACTTATTCGTGTGGTGATGTTTCACTGGGTTGTTCCTGTGGTGACTGCAGTTCATCTCCTGTGTGCTCTAGTAAAGCACCTCCTTCTCTCCATAAACAGGGCTCCTGTTCAGTAAGGATTGGATCTCTTAAGGCCAAATGTGTCGACTTTGCTTTAACAATCCTGTATATAGTACTGGTTTCTGTGTTTCTTGGGTGGGGTTTCTTTCATCGTAAAAAAGAAAGGAACAAAACCTTTAGAATGAAGCCACTGTTGAATGTGATGGATGGTGGTGAACTCCATCCTGTTGATAGGCCGAAAGATGAGAATGTCCCCATGCAGATGCGTGAAGATGCTTCTCAAACTAGAAACAGGATTCAACTTTCAATTGTGCAAGGATATATGTCAAGTTTTTACAGGAAATATGGAACATGGGTTGCTAGAAATCCAACTCTCATATTGGGTTTGTCACTGGCTATAGTTCTTCTGCTTTGTTTAGGTCTAATCCGTTTCAAGGTGGAAACACGACCTGAGAAGCTATGGGTGGGACCTGGGAGTAAAGCTGCAGAAGAGAAACAATTTTTTGACGGCCACCTGGCCCCTTTTTACAGAATTGAACAGCTAATATTGGCAACAATTCCAGATACTACACATGGGAAGCTACCCAGTATTGTGACAGAGAGTAACATTAAGTTGCTTTTTGATATACAGAAGAAGATAGATGGACTTCGTGCAAACTATTCCGGCTCTATGATATCTCTGACTGACATTTGCATGAAGCCATTGGACCAGGATTGTGCCACACAAAGTGTTTTGCAGTATTTCAAAATGGATCCTGACAATTTTGATAATTACGGAGGAGTTGACCATGTGAAGTATTGTTTTCAGCATTTTACCTCTACGGACAACTGTATGAGCGCTTTCAAAGGCCCACTTGATCCAAGCACTGCATTAGGAGGTTTCTCTGGGAACAATTATTCTGAGGCATCTGCATTTATAGTAACTTATCCAGTAGACAACGCTATCGATAAAGAAGGGAATGAAACTAAAAGAGCAGTGGCTTGGGAGAAGGCCTTTATTCAGTTAGTTAAGGATGAGTTGTTGCCAATGGCACAGTCTAAAAATTTAACACTTTCTTTTTCATCGGAAAGTTCCATAGAGGAAGAACTGAAAAGAGAAAGCACTGCAGATGCCATAACTATACTGATAAGCTATCTAGTGATGTTTGCTTACATATCTCTTACTCTGGGTGATACACCTCGCTTATCTTCCTTCTACATTTCTTCTAAGGTACTGCTTGGTCTTTCTGGAGTTGTTCTTGTAATGCTGTCTGTTCTTGGATCAGTTGGTTTCTTCAGTGCAATTGGAGTAAAATCTACTCTAATCATTATGGAAGTTATACCTTTTCTTGTTCTAGCAGTTGGTGTGGATAATATGTGTATACTGGTGCATGCTGTTAAGCGGCAACCACTGGAATTGCCTTTAGAAGGGCGAATAAGCAATGCCCTTGTGGAAGTTGGACCATCTATAACACTTGCTAGTCTATCTGAGGTTTTAGCATTTGCAGTTGGAAGTTTTATTCCTATGCCAGCCTGCCGTGTGTTCTCCATGTTTGCTGCATTGGCTGTTCTGTTGGACTTCCTTCTGCAAGTTACTGCTTTTGTTGCTTTAATAGTTTTTGACTTTTTGCGAGCTGAGGATAAGAGGATTGATTGTTTTCCATGCTTAAAAATATCTTCATCATATCCTGACTCTGATAAAGGCATTGGTCGGAGAAAACCTGGGTTGTTGGCTCATTACATGAAGGAGGTCCATGCCCCGATTCTGAGTCTTTGGGGAGTGAAAATAGTAGTCATTTCTGTATTTGTTGCGTTCGCTTTGGCTAGCATTGCCTTATCCACCCGGATTGAACCTGGTTTGGAACAAAAGATTGTTCTTCCCCGTGACTCATATCTTCAGGGGTATTTTAATAATGTTTCAGAGCATCTCAGAATTGGACCGCCTCTGTATTTTGTTGTGAAGAACTATAATTACAGCTCAGAATCGAGGCAAACGAATCAGCTTTGTTCTATCAGCCAATGTGATTCAGAATCTCTTTTAAATGAGATTGCAAGAGTGTCGTTAGTTCCAGAAACAAGCTACATAGCTAAACCAGCTGCTTCATGGCTTGATGATTTCCTGGTATGGATATCTCCTGAAGCATTCGGTTGCTGTCGAAAGTACACGAATGGGAGTTATTGTCCCCCCGATGACCAGCCTCCTTGCTGTCCAGCTGGTCAAAGTTCTTGTGGACTGGGTGGACCATGTAAAGACTGTACCACGTGCTTCCACCACTCAGATTTACTTAATGATCGACCATCTACTGCACAATTCAAGGAGAAACTTCCATGGTTCCTCAATGCTCTGCCTTCTGCTGATTGTGCTAAGGGTGGCCATGGTGCATACACCAGCAGTGTGGAATTGAGAGGTTATGAAAGTGGCATTATCCAAGCTTCATCCTTCCGCACTTATCATACACCCCTCAACAAGCAGGTTGATTATGTTAATTCCATGAGGGCTGCTCGAGAGTTCAGTTCAAGAGTTTCTGATTCGTTGAAGATTGATATCTTTCCATATTCAGTGTTTTATATGTTTTTTGAGCAATACCTCAATATATGGAGAACAGCATTGATCAACCTTGCTATAGCTATAGGAGCCGTATTTGTCGTTTGTTTAGTTATTACATGGAGCTTTTGGAGTTCAGCCATCATTTTGCTGGTGTTGACTATGATTGTGGTGGATCTCATGGGTGTGATGGCAATTTTGAAGATCCAACTGAATGCAGTCTCTGTTGTTAATCTTATTATGTCCGTTGGCATCGCTGTTGAGTTCTGTGTGCATATAACACACGCATTTTCAGTAAGCAGTGGGGATAAAGACCAACGTGTGAAAGAGGCTCTTGGTACAATGGGTGCTTCTGTCTTCAGTGGAATCACACTAACAAAGCTAGTTGGAGTGATTGTTCTTTGCTTCTCAAGGACAGAAGTCTTTGTGGTTTATTACTTCCAGATGTACCTGGCATTGGTACTTCTTGGTTTCTTACATGGACTTGTATTTTTACCCGTTGTATTAAGCGTGTTAGGTCCGCCTTCAAGATGTGTACTTGTGGAGAAGCAAGGAGATAGACCATCAGTTTCTTCACAGTAA
Protein:  
MELSRSLRFLLSISLFQVLFILSIVRAERSDTRMLLTSDGVTGVKHVEGYCAMYDICGARSDGKILNCPNGSPSVKPDDLLSSKIQSLCPTITGNVCCTEAQFNILRSQVQQAIPFLVGCPACLRNFLNLFCELSCSPNQSLFINVTSVSQVNKNMTVNEIDYYITDTFGQGLYESCKDVKFGTMNTRALDFIGSGAQNFKDWFTFIGRRAAPNLPGSPYPIKFLPSAPESSGMKPMNVTTYSCGDVSLGCSCGDCSSSPVCSSKAPPSLHKQGSCSVRIGSLKAKCVDFALTILYIVLVSVFLGWGFFHRKKERNKTFRMKPLLNVMDGGELHPVDRPKDENVPMQMREDASQTRNRIQLSIVQGYMSSFYRKYGTWVARNPTLILGLSLAIVLLLCLGLIRFKVETRPEKLWVGPGSKAAEEKQFFDGHLAPFYRIEQLILATIPDTTHGKLPSIVTESNIKLLFDIQKKIDGLRANYSGSMISLTDICMKPLDQDCATQSVLQYFKMDPDNFDNYGGVDHVKYCFQHFTSTDNCMSAFKGPLDPSTALGGFSGNNYSEASAFIVTYPVDNAIDKEGNETKRAVAWEKAFIQLVKDELLPMAQSKNLTLSFSSESSIEEELKRESTADAITILISYLVMFAYISLTLGDTPRLSSFYISSKVLLGLSGVVLVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQPLELPLEGRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMFAALAVLLDFLLQVTAFVALIVFDFLRAEDKRIDCFPCLKISSSYPDSDKGIGRRKPGLLAHYMKEVHAPILSLWGVKIVVISVFVAFALASIALSTRIEPGLEQKIVLPRDSYLQGYFNNVSEHLRIGPPLYFVVKNYNYSSESRQTNQLCSISQCDSESLLNEIARVSLVPETSYIAKPAASWLDDFLVWISPEAFGCCRKYTNGSYCPPDDQPPCCPAGQSSCGLGGPCKDCTTCFHHSDLLNDRPSTAQFKEKLPWFLNALPSADCAKGGHGAYTSSVELRGYESGIIQASSFRTYHTPLNKQVDYVNSMRAAREFSSRVSDSLKIDIFPYSVFYMFFEQYLNIWRTALINLAIAIGAVFVVCLVITWSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLIMSVGIAVEFCVHITHAFSVSSGDKDQRVKEALGTMGASVFSGITLTKLVGVIVLCFSRTEVFVVYYFQMYLALVLLGFLHGLVFLPVVLSVLGPPSRCVLVEKQGDRPSVSSQ